• Cruz, M., *J.D. Arbelaez, K. Loaiza, J. Cuasquer, J. Rosas, and E. Graterol. 2021. Genetic and phenotypic characterization of rice grain quality traits to define research strategies for improving rice milling, appearance, and cooking qualities in Latin America and the Caribbean. Plant Genome e20134. doi:10.1002/TPG2.20134
  • Waheed, R., J.C. Ignacio, *J.D. Arbelaez, V.M. Juanillas, M. Asif, A. Henry, T. Kretzschmar, and M. Arif. 2021. Drought response QTLs in a Super Basmati × Azucena population by high-density GBS-based SNP linkage mapping. Plant Breed. pbr.12961. doi:10.1111/PBR.12961
  • Melandri, G., M. Sikirou, J.D. Arbelaez, A. Shittu, V.K. Semwal, K.A. Konaté, A.T. Maji, S.A. Ngaujah, I. Akintayo, V. Govindaraj, Y. Shi, F.J. Agosto-Peréz, A. Greenberg, G. Atlin, V. Ramaiah, and S.R. McCouch. 2020. Multiple small-effect alleles of indica origin enhance field-based Fe-toxicity tolerance in rice for West Africa. Front. Plant Sci. 11:2195. doi:10.3389/fpls.2020.604938
  • Morales, K.Y., N. Singh, F.A. Perez, J.C. Ignacio, R. Thapa, J.D. Arbelaez, R.E. Tabien, A. Famoso, D.R. Wang, E.M. Septiningsih, Y. Shi, T. Kretzschmar, S.R. McCouch, and M.J. Thomson. 2020. An improved 7K SNP array, the C7AIR, provides a wealth of validated SNP markers for rice breeding and genetics studies. PLoS One 15:e0232479. doi:10.1371/journal.pone.0232479
  • Tarun, J.A., R. Mauleon, J.D. Arbelaez, S. Catausan, S. Dixit, A. Kumar, P. Brown, A. Kohli, and T. Kretzschmar. 2020. Comparative transcriptomics and co-expression networks reveal tissue-and genotype-specific responses of qdtys to reproductive-stage drought stress in rice (Oryza sativa L.). Genes (Basel). 11:1–27. doi:10.3390/genes11101124
  • Arbelaez, J.D., M.S. Dwiyanti, E. Tandayu, K. Llantada, A. Jarana, et al. 2019. 1k-RiCA (1K-Rice Custom Amplicon) a novel genotyping amplicon-based SNP assay for genetics and breeding applications in rice. Rice 12(1): 55. doi: 10.1186/s12284-019-0311-0.
  • Cobb, J.N., R.U. Juma, P.S. Biswas, J.D. Arbelaez, J. Rutkoski, et al. 2019. Enhancing the rate of genetic gain in public-sector plant breeding programs: lessons from the breeder’s equation. Theoretical and Applied Genetics 132(3): 627–645. doi: 10.1007/s00122-019-03317-0.
  • Arbelaez, J.D., E. Tandayu, M.Y. Reveche, A. Jarana, P. van Rogen, et al. 2019. Methodology: ssb-MASS: a single seed-based sampling strategy for marker-assisted selection in rice. Plant Methods 15(1): 78. doi: 10.1186/s13007-019-0464-2.
  • Arbelaez, J.D., L.G. Maron, T.O. Jobe, M.A. Piñeros, A.N. Famoso, et al. 2017. ALUMINUM RESISTANCE TRANSCRIPTION FACTOR 1 ( ART1 ) contributes to natural variation in aluminum resistance in diverse genetic backgrounds of rice ( O. sativa ). Plant Direct 1(4): e00014. doi: 10.1002/pld3.14.
  • Ogawa, S., M.O. Valencia, M. Lorieux, J.D. Arbelaez, S. McCouch, et al. 2016. Identification of QTLs associated with agronomic performance under nitrogen-deficient conditions using chromosome segment substitution lines of a wild rice relative, Oryza rufipogon. Acta Physiologiae Plantarum 38(4): 1–10. doi: 10.1007/s11738-016-2119-5.
  • Arbelaez, J.D., L.T. Moreno, N. Singh, C.W. Tung, L.G. Maron, et al. 2015. Development and GBS-genotyping of introgression lines (ILs) using two wild species of rice, O. meridionalis and O. rufipogon, in a common recurrent parent, O. sativa cv. Curinga. Molecular Breeding 35(2): 1–18. doi: 10.1007/s11032-015-0276-7.
  • Ogawa, S., M.G. Selvaraj, A.J. Fernando, M. Lorieux, M. Ishitani, et al. 2014. N- and P-mediated seminal root elongation response in rice seedlings. Plant and Soil 375(1–2): 303–315. doi: 10.1007/s11104-013-1955-y.
  • Orjuela, J., A. Garavito, M. Bouniol, J.D. Arbelaez, L. Moreno, et al. 2010. A universal core genetic map for rice. Theoretical and Applied Genetics 120(3): 563–572. doi: 10.1007/s00122-009-1176-1.